- Location: Batavia, NY
- League: New York-Penn League
- Affiliate: Philadelphia Phillies 1998-2006; St. Louis Cardinals 2007-2012; Miami Marlins 2013-2019.
- Ballpark: Dwyer Stadium II
- Famous Alumni: Marlon Byrd
The Batavia Muckdogs were a member of the New York-Penn League for two decades. They played their home games at Dwyer Stadium II in Batavia, New York and used to be named the Batavia Clippers. When the team lost their affiliation in 2021 they joined the Perfect Game Collegiate Baseball League.