San Diego Padres Top Prospects
| Before 2018 Season | ||
| 9 | Fernando Tatis Jr. | SS |
| 26 | MacKenzie Gore | LHP |
| 28 | Michel Báez | RHP |
| 32 | Luis Urías | 2B |
| 52 | Cal Quantrill | RHP |
| 66 | Adrián Morejón | LHP |
| After 2018 Season | ||
| 2 | Fernando Tatis Jr. | SS |
| 28 | MacKenzie Gore | LHP |
| 31 | Luis Urías | 2B |
| 32 | Francisco Mejia | C |
| 52 | Adrián Morejón | LHP |
| 66 | Chris Paddack | RHP |
| 67 | Luis Patiño | RHP |
| 92 | Logan Allen | LHP |
| 99 | Josh Naylor | 1B |
Rankings are by Baseball America,
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| Before 2018 Season | ||
| 8 | Fernando Tatis Jr. | SS |
| 19 | MacKenzie Gore | LHP |
| 36 | Luis Urías | 2B/SS |
| 40 | Cal Quantrill | RHP |
| 42 | Michel Báez | RHP |
| 50 | Adrián Morejón | LHP |
| 89 | Anderson Espinoza | RHP |
| After 2018 Season | ||
| 2 | Fernando Tatis Jr. | SS |
| 15 | MacKenzie Gore | LHP |
| 23 | Luis Urías | INF |
| 26 | Francisco Mejia | C/OF |
| 34 | Chris Paddack | RHP |
| 48 | Luis Patiño | RHP |
| 49 | Adrián Morejón | LHP |
| 72 | Michel Báez | RHP |
| 74 | Logan Allen | LHP |
| 93 | Ryan Weathers | LHP |
Rankings are by Jonathan Mayo of MLB.com.
| Before 2018 Season | ||
| 9 | Fernando Tatis Jr. | SS |
| 29 | MacKenzie Gore | LHP |
| 48 | Cal Quantrill | RHP |
| 50 | Adrián Morejón | LHP |
| 52 | Michel Báez | RHP |
| 74 | Luis Urías | MI |
| After 2018 Season | ||
| 3 | Fernando Tatis Jr. | SS |
| 17 | Luis Urías | 2B |
| 20 | Francisco Mejia | C |
| 28 | MacKenzie Gore | LHP |
| 37 | Chris Paddack | RHP |
| 72 | Adrián Morejón | LHP |
| 74 | Luis Patiño | RHP |
| 84 | Logan Allen | LHP |
| 85 | Michel Báez | RHP |
Rankings are by BaseballProspectus.com.
Affiliates Batting
Affiliates Fielding & Misc
Organizational Batting
- Note traded players may have full-season stats showing.
Organizational Pitching
- Note traded players may have full-season stats showing.
Affiliates Pitching